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LOC114961233 aspartyl/asparaginyl beta-hydroxylase-like [ Acropora millepora ]

Gene ID: 114961233, updated on 30-Nov-2023

Summary

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Gene symbol
LOC114961233
Gene description
aspartyl/asparaginyl beta-hydroxylase-like
See related
EnsemblRapid:LOC114961233
Gene type
protein coding
RefSeq status
MODEL
Organism
Acropora millepora
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Acroporidae; Acropora
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Genomic context

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See LOC114961233 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Amil_v2.1 (GCF_013753865.1) 9 NC_058074.1 (471399..478143)
100 previous assembly amil_sf_1.1 (GCF_004143615.1) Unplaced Scaffold NW_021126480.1 (464406..471135)

Chromosome 9 - NC_058074.1Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor 1-like Neighboring gene probable ATP-dependent RNA helicase DHX35 Neighboring gene uncharacterized LOC114961234 Neighboring gene kelch-like protein 17 Neighboring gene exostosin-1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: aspartyl/asparaginyl beta-hydroxylase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acropora millepora Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amil_v2.1

Genomic

  1. NC_058074.1 Reference Amil_v2.1

    Range
    471399..478143
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029339863.2 → XP_029195696.2  LOW QUALITY PROTEIN: aspartyl/asparaginyl beta-hydroxylase-like

    Related
    XP_029195696.2, XM_029339863.2
    Conserved Domains (3) summary
    COG0457
    Location:164 → 393
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:237 → 264
    TPR; TPR repeat [structural motif]
    cl40423
    Location:372 → 531
    cupin_RmlC-like; RmlC-like cupin superfamily
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases