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PTPRCAP protein tyrosine phosphatase receptor type C associated protein [ Monodon monoceros (narwhal) ]

Gene ID: 114886879, updated on 15-Mar-2024

Summary

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Gene symbol
PTPRCAP
Gene description
protein tyrosine phosphatase receptor type C associated protein
See related
Ensembl:ENSMMNG00015019739
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodon monoceros
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Monodon
Orthologs
human mouse all
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Genomic context

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See PTPRCAP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current NGI_Narwhal_1 (GCF_005190385.1) Unplaced Scaffold NW_021703784.1 (102174264..102176710, complement)

NW_021703784.1Genomic Context describing neighboring genes Neighboring gene carnosine synthase 1 Neighboring gene ribosomal protein S6 kinase B2 Neighboring gene coronin 1B Neighboring gene G protein-coupled receptor 152

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_021703784 Unplaced Scaffold Reference NGI_Narwhal_1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein tyrosine phosphatase receptor type C-associated protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monodon monoceros Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NGI_Narwhal_1

Genomic

  1. NW_021703784.1 Reference NGI_Narwhal_1

    Range
    102174264..102176710 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029207972.1 → XP_029063805.1  protein tyrosine phosphatase receptor type C-associated protein isoform X1

    UniProtKB/TrEMBL
    A0A4V6WNW9
    Related
    ENSMMNP00015026994.1, ENSMMNT00015029668.1
    Conserved Domains (1) summary
    pfam15713
    Location:59 → 205
    PTPRCAP; Protein tyrosine phosphatase receptor type C-associated

  2. XM_029207973.1 → XP_029063806.1  protein tyrosine phosphatase receptor type C-associated protein isoform X2

    Conserved Domains (1) summary
    pfam15713
    Location:116 → 262
    PTPRCAP; Protein tyrosine phosphatase receptor type C-associated
Nucleotide Protein
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