U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

mgat5 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [ Betta splendens (Siamese fighting fish) ]

Gene ID: 114870384, updated on 20-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
mgat5
Gene description
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase
See related
EnsemblRapid:ENSBSLG00000019651
Gene type
protein coding
RefSeq status
MODEL
Organism
Betta splendens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Osphronemidae; Betta
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See mgat5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_04 current fBetSpl5.4 (GCF_900634795.4) 2 NC_040882.2 (6392371..6481828)
101 previous assembly fBetSpl5.3 (GCF_900634795.3) 2 NC_040882.1 (6472198..6560690)

Chromosome 2 - NC_040882.2Genomic Context describing neighboring genes Neighboring gene chloride intracellular channel protein 5-like Neighboring gene uncharacterized LOC129603846 Neighboring gene NLR family CARD domain-containing protein 3-like Neighboring gene transmembrane protein 163-like Neighboring gene cyclin-T2-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_900634795.4-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fBetSpl5.4 Primary Assembly

Genomic

  1. NC_040882.2 Reference fBetSpl5.4 Primary Assembly

    Range
    6392371..6481828
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029174901.3 → XP_029030734.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A6P7PEZ9
    Related
    ENSBSLP00000041712.1, ENSBSLT00000045918.3
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:5 → 138
    DUF4525; Domain of unknown function (DUF4525)

  2. XM_029174908.3 → XP_029030741.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A6P7PEZ9
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:5 → 138
    DUF4525; Domain of unknown function (DUF4525)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.