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lman2la lectin, mannose-binding 2-like a [ Betta splendens (Siamese fighting fish) ]

Gene ID: 114866635, updated on 20-Aug-2024

Summary

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Gene symbol
lman2la
Gene description
lectin, mannose-binding 2-like a
See related
EnsemblRapid:ENSBSLG00000014871
Gene type
protein coding
RefSeq status
MODEL
Organism
Betta splendens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Osphronemidae; Betta
Also known as
lman2l
Orthologs
zebrafish all
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Genomic context

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See lman2la in Genome Data Viewer
Location:
chromosome: 12
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_04 current fBetSpl5.4 (GCF_900634795.4) 12 NC_040892.2 (5458063..5462829)
101 previous assembly fBetSpl5.3 (GCF_900634795.3) 12 NC_040892.1 (5457929..5462829)

Chromosome 12 - NC_040892.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114867051 Neighboring gene T-box transcription factor 3a Neighboring gene mediator of RNA polymerase II transcription subunit 13-like Neighboring gene ADP-ribosylation factor-like protein 3 Neighboring gene mitochondrial fission process 1 Neighboring gene WW domain binding protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lectin, mannose-binding 2-like a
Names
lectin, mannose binding 2 like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_900634795.4-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fBetSpl5.4 Primary Assembly

Genomic

  1. NC_040892.2 Reference fBetSpl5.4 Primary Assembly

    Range
    5458063..5462829
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029168640.3 → XP_029024473.3  lectin, mannose-binding 2-like a isoform X2

    UniProtKB/TrEMBL
    A0A6P7P2L0
    Related
    ENSBSLP00000029901.3, ENSBSLT00000033137.3

  2. XM_029168639.3 → XP_029024472.1  lectin, mannose-binding 2-like a isoform X1

    UniProtKB/TrEMBL
    A0A6P7NWZ4
    Related
    ENSBSLP00000029933.1, ENSBSLT00000033167.3
    Conserved Domains (1) summary
    cl14058
    Location:55 → 314
    lectin_L-type; legume lectins
Nucleotide Protein
Heading Accession and Version

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