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hs3st1 heparan sulfate (glucosamine) 3-O-sulfotransferase 1 [ Betta splendens (Siamese fighting fish) ]

Gene ID: 114864650, updated on 20-Aug-2024

Summary

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Gene symbol
hs3st1
Gene description
heparan sulfate (glucosamine) 3-O-sulfotransferase 1
See related
EnsemblRapid:ENSBSLG00000010754
Gene type
protein coding
RefSeq status
MODEL
Organism
Betta splendens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Osphronemidae; Betta
Orthologs
human zebrafish all
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Genomic context

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See hs3st1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_04 current fBetSpl5.4 (GCF_900634795.4) 10 NC_040890.2 (15899044..15901458, complement)
101 previous assembly fBetSpl5.3 (GCF_900634795.3) 10 NC_040890.1 (15899044..15901439, complement)

Chromosome 10 - NC_040890.2Genomic Context describing neighboring genes Neighboring gene zinc finger protein 518B Neighboring gene cytokine-dependent hematopoietic cell linker Neighboring gene uncharacterized LOC121202551 Neighboring gene RAB28, member RAS oncogene family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 1
Names
heparan sulfate-glucosamine 3-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_900634795.4-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fBetSpl5.4 Primary Assembly

Genomic

  1. NC_040890.2 Reference fBetSpl5.4 Primary Assembly

    Range
    15899044..15901458 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029165561.3 → XP_029021394.1  heparan sulfate glucosamine 3-O-sulfotransferase 1

    UniProtKB/TrEMBL
    A0A6P7NV24
    Related
    ENSBSLP00000020911.1, ENSBSLT00000023400.3
    Conserved Domains (1) summary
    pfam00685
    Location:52 → 289
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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