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ctbp1 C-terminal binding protein 1 [ Betta splendens (Siamese fighting fish) ]

Gene ID: 114864018, updated on 20-Aug-2024

Summary

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Gene symbol
ctbp1
Gene description
C-terminal binding protein 1
See related
EnsemblRapid:ENSBSLG00000012505
Gene type
protein coding
RefSeq status
MODEL
Organism
Betta splendens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Osphronemidae; Betta
Orthologs
zebrafish all
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Genomic context

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See ctbp1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_04 current fBetSpl5.4 (GCF_900634795.4) 10 NC_040890.2 (10283922..10294890, complement)
101 previous assembly fBetSpl5.3 (GCF_900634795.3) 10 NC_040890.1 (10283922..10294930, complement)

Chromosome 10 - NC_040890.2Genomic Context describing neighboring genes Neighboring gene lysine (K)-specific demethylase 3B Neighboring gene spondin 2a, extracellular matrix protein Neighboring gene protein FAM53C-like Neighboring gene 5-phosphohydroxy-L-lysine phospho-lyase Neighboring gene heterogeneous nuclear ribonucleoprotein A/Ba

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_900634795.4-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fBetSpl5.4 Primary Assembly

Genomic

  1. NC_040890.2 Reference fBetSpl5.4 Primary Assembly

    Range
    10283922..10294890 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041072584.2 → XP_040928518.1  C-terminal-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7NR38
    Conserved Domains (1) summary
    cd05299
    Location:35 → 353
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_029164615.3 → XP_029020448.1  C-terminal-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7NR38
    Related
    ENSBSLP00000025151.1, ENSBSLT00000028069.3
    Conserved Domains (1) summary
    cd05299
    Location:35 → 353
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_041072585.2 → XP_040928519.1  C-terminal-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7NR38
    Conserved Domains (1) summary
    cd05299
    Location:35 → 353
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_029164616.3 → XP_029020449.1  C-terminal-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P7NSD9
    Related
    ENSBSLP00000025183.2, ENSBSLT00000028102.3
    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
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