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galnt9 polypeptide N-acetylgalactosaminyltransferase 9 [ Betta splendens (Siamese fighting fish) ]

Gene ID: 114861833, updated on 20-Aug-2024

Summary

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Gene symbol
galnt9
Gene description
polypeptide N-acetylgalactosaminyltransferase 9
See related
EnsemblRapid:ENSBSLG00000021169
Gene type
protein coding
RefSeq status
MODEL
Organism
Betta splendens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Osphronemidae; Betta
Orthologs
human zebrafish all
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Genomic context

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See galnt9 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_04 current fBetSpl5.4 (GCF_900634795.4) 9 NC_040889.2 (15686111..15742838)
101 previous assembly fBetSpl5.3 (GCF_900634795.3) 9 NC_040889.1 (15892606..15949316)

Chromosome 9 - NC_040889.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129604584 Neighboring gene uncharacterized LOC121202447 Neighboring gene ATPase family AAA domain containing 1a Neighboring gene 5-hydroxytryptamine (serotonin) receptor 7c

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_900634795.4-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fBetSpl5.4 Primary Assembly

Genomic

  1. NC_040889.2 Reference fBetSpl5.4 Primary Assembly

    Range
    15686111..15742838
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029161483.3 → XP_029017316.1  polypeptide N-acetylgalactosaminyltransferase 9

    UniProtKB/TrEMBL
    A0A6P7NCF6
    Related
    ENSBSLP00000044866.1, ENSBSLT00000049266.3
    Conserved Domains (2) summary
    cd02510
    Location:155 → 454
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:467 → 593
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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