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LOC114860487 heparan sulfate glucosamine 3-O-sulfotransferase 6-like [ Betta splendens (Siamese fighting fish) ]

Gene ID: 114860487, updated on 20-Aug-2024

Summary

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Gene symbol
LOC114860487
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 6-like
See related
EnsemblRapid:ENSBSLG00000016697
Gene type
protein coding
RefSeq status
MODEL
Organism
Betta splendens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Osphronemidae; Betta
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Genomic context

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See LOC114860487 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_04 current fBetSpl5.4 (GCF_900634795.4) 8 NC_040888.2 (4499386..4507032)
101 previous assembly fBetSpl5.3 (GCF_900634795.3) 8 NC_040888.1 (4683093..4690747)

Chromosome 8 - NC_040888.2Genomic Context describing neighboring genes Neighboring gene methionine-R-sulfoxide reductase B1-A-like Neighboring gene methionine-R-sulfoxide reductase B1-A-like Neighboring gene fumarylacetoacetate hydrolase domain containing 1 Neighboring gene hydroxyacylglutathione hydrolase, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_900634795.4-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fBetSpl5.4 Primary Assembly

Genomic

  1. NC_040888.2 Reference fBetSpl5.4 Primary Assembly

    Range
    4499386..4507032
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029159130.3 → XP_029014963.1  heparan sulfate glucosamine 3-O-sulfotransferase 6-like

    UniProtKB/TrEMBL
    A0A6P7N9H9
    Related
    ENSBSLP00000034436.1, ENSBSLT00000038068.3
    Conserved Domains (1) summary
    pfam00685
    Location:122 → 358
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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