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b4galt5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 [ Betta splendens (Siamese fighting fish) ]

Gene ID: 114858435, updated on 20-Aug-2024

Summary

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Gene symbol
b4galt5
Gene description
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5
See related
EnsemblRapid:ENSBSLG00000008050
Gene type
protein coding
RefSeq status
MODEL
Organism
Betta splendens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Osphronemidae; Betta
Orthologs
zebrafish all
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Genomic context

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See b4galt5 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_04 current fBetSpl5.4 (GCF_900634795.4) 7 NC_040887.2 (2747521..2770493, complement)
101 previous assembly fBetSpl5.3 (GCF_900634795.3) 7 NC_040887.1 (3016805..3039753, complement)

Chromosome 7 - NC_040887.2Genomic Context describing neighboring genes Neighboring gene AAR2 splicing factor Neighboring gene EMILIN-3 Neighboring gene solute carrier family 9 member 8 Neighboring gene opsin-5-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoprotein biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_900634795.4-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fBetSpl5.4 Primary Assembly

Genomic

  1. NC_040887.2 Reference fBetSpl5.4 Primary Assembly

    Range
    2747521..2770493 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029155659.3 → XP_029011492.1  beta-1,4-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A6P7MWZ0
    Related
    ENSBSLP00000015310.1, ENSBSLT00000017309.3
    Conserved Domains (1) summary
    cd00899
    Location:154 → 369
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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