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ano5a anoctamin 5a [ Betta splendens (Siamese fighting fish) ]

Gene ID: 114857580, updated on 20-Aug-2024

Summary

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Gene symbol
ano5a
Gene description
anoctamin 5a
See related
EnsemblRapid:ENSBSLG00000001457
Gene type
protein coding
RefSeq status
MODEL
Organism
Betta splendens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Osphronemidae; Betta
Also known as
ano5
Orthologs
human zebrafish all
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Genomic context

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See ano5a in Genome Data Viewer
Location:
chromosome: 6
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2023_04 current fBetSpl5.4 (GCF_900634795.4) 6 NC_040886.2 (13391724..13405670)
101 previous assembly fBetSpl5.3 (GCF_900634795.3) 6 NC_040886.1 (13553884..13567835)

Chromosome 6 - NC_040886.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129604259 Neighboring gene anoctamin-9 Neighboring gene uracil nucleotide/cysteinyl leukotriene receptor-like Neighboring gene vesicular glutamate transporter 2.1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-5
Names
anoctamin 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_900634795.4-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fBetSpl5.4 Primary Assembly

Genomic

  1. NC_040886.2 Reference fBetSpl5.4 Primary Assembly

    Range
    13391724..13405670
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055509860.1 → XP_055365835.1  anoctamin-5 isoform X1

    UniProtKB/TrEMBL
    A0A9W2XW60
    Related
    ENSBSLP00000002596.2, ENSBSLT00000003042.3

  2. XM_055509861.1 → XP_055365836.1  anoctamin-5 isoform X2

    UniProtKB/TrEMBL
    A0A9W2XUZ6
    Related
    ENSBSLP00000002518.2, ENSBSLT00000002963.3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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