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large2 LARGE xylosyl- and glucuronyltransferase 2 [ Betta splendens (Siamese fighting fish) ]

Gene ID: 114852215, updated on 20-Aug-2024

Summary

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Gene symbol
large2
Gene description
LARGE xylosyl- and glucuronyltransferase 2
See related
EnsemblRapid:ENSBSLG00000004866
Gene type
protein coding
RefSeq status
MODEL
Organism
Betta splendens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Osphronemidae; Betta
Orthologs
zebrafish all
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Genomic context

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See large2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_04 current fBetSpl5.4 (GCF_900634795.4) 3 NC_040883.2 (10191835..10221385)
101 previous assembly fBetSpl5.3 (GCF_900634795.3) 3 NC_040883.1 (10246970..10276512)

Chromosome 3 - NC_040883.2Genomic Context describing neighboring genes Neighboring gene para-nitrobenzyl esterase Neighboring gene uncharacterized LOC121202136 Neighboring gene uncharacterized LOC114852681 Neighboring gene nuclear receptor ROR-alpha A-like Neighboring gene uncharacterized LOC129603876

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylosyl- and glucuronyltransferase LARGE2s

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_900634795.4-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fBetSpl5.4 Primary Assembly

Genomic

  1. NC_040883.2 Reference fBetSpl5.4 Primary Assembly

    Range
    10191835..10221385
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029144466.3 → XP_029000299.1  xylosyl- and glucuronyltransferase LARGE2s isoform X2

    UniProtKB/TrEMBL
    A0A6P7M2D7
    Related
    ENSBSLP00000010488.2, ENSBSLT00000011801.3
    Conserved Domains (2) summary
    cd06431
    Location:132 → 411
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:467 → 736
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  2. XM_029144463.3 → XP_029000296.1  xylosyl- and glucuronyltransferase LARGE2s isoform X1

    UniProtKB/TrEMBL
    A0A6P7M264
    Conserved Domains (2) summary
    cd06431
    Location:132 → 411
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:469 → 738
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  3. XM_029144462.3 → XP_029000295.1  xylosyl- and glucuronyltransferase LARGE2s isoform X1

    UniProtKB/TrEMBL
    A0A6P7M264
    Conserved Domains (2) summary
    cd06431
    Location:132 → 411
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:469 → 738
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  4. XM_029144464.3 → XP_029000297.1  xylosyl- and glucuronyltransferase LARGE2s isoform X1

    UniProtKB/TrEMBL
    A0A6P7M264
    Related
    ENSBSLP00000010537.2, ENSBSLT00000011870.3
    Conserved Domains (2) summary
    cd06431
    Location:132 → 411
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:469 → 738
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
Nucleotide Protein
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