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tgfb2 transforming growth factor, beta 2 [ Betta splendens (Siamese fighting fish) ]

Gene ID: 114842806, updated on 20-Aug-2024

Summary

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Gene symbol
tgfb2
Gene description
transforming growth factor, beta 2
See related
EnsemblRapid:ENSBSLG00000022875
Gene type
protein coding
RefSeq status
MODEL
Organism
Betta splendens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Osphronemidae; Betta
Orthologs
human zebrafish all
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Genomic context

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See tgfb2 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_04 current fBetSpl5.4 (GCF_900634795.4) 16 NC_040896.2 (1603145..1655137)
101 previous assembly fBetSpl5.3 (GCF_900634795.3) 16 NC_040896.1 (1603091..1655137)

Chromosome 16 - NC_040896.2Genomic Context describing neighboring genes Neighboring gene vascular endothelial growth factor A-A-like Neighboring gene uncharacterized LOC129603222 Neighboring gene ribosomal RNA processing 15 homolog Neighboring gene uncharacterized LOC129603225 Neighboring gene prolactin regulatory element binding

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables type II transforming growth factor beta receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables type III transforming growth factor beta receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in SMAD protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transforming growth factor beta-2 proprotein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_900634795.4-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fBetSpl5.4 Primary Assembly

Genomic

  1. NC_040896.2 Reference fBetSpl5.4 Primary Assembly

    Range
    1603145..1655137
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029128701.3 → XP_028984534.1  transforming growth factor beta-2 proprotein

    UniProtKB/TrEMBL
    A0A6P7KVC1
    Related
    ENSBSLP00000048092.1, ENSBSLT00000052779.2
    Conserved Domains (2) summary
    pfam00688
    Location:21 → 228
    TGFb_propeptide; TGF-beta propeptide
    pfam00019
    Location:314 → 412
    TGF_beta; Transforming growth factor beta like domain
Nucleotide Protein
Heading Accession and Version

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