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hs3st1l1 heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like1 [ Betta splendens (Siamese fighting fish) ]

Gene ID: 114841970, updated on 20-Aug-2024

Summary

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Gene symbol
hs3st1l1
Gene description
heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like1
See related
EnsemblRapid:ENSBSLG00000002274
Gene type
protein coding
RefSeq status
MODEL
Organism
Betta splendens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Osphronemidae; Betta
Orthologs
zebrafish all
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Genomic context

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See hs3st1l1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_04 current fBetSpl5.4 (GCF_900634795.4) 15 NC_040895.2 (6025687..6045109, complement)
101 previous assembly fBetSpl5.3 (GCF_900634795.3) 15 NC_040895.1 (6184453..6203863, complement)

Chromosome 15 - NC_040895.2Genomic Context describing neighboring genes Neighboring gene homeobox protein vent1-like Neighboring gene uncharacterized LOC114842224 Neighboring gene uncharacterized LOC114842096 Neighboring gene deoxynucleotidyltransferase, terminal Neighboring gene B cell linker

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_900634795.4-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fBetSpl5.4 Primary Assembly

Genomic

  1. NC_040895.2 Reference fBetSpl5.4 Primary Assembly

    Range
    6025687..6045109 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029127299.3 → XP_028983132.1  heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like1

    UniProtKB/TrEMBL
    A0A6P7KKN7
    Related
    ENSBSLP00000066784.1, ENSBSLT00000064649.2
    Conserved Domains (1) summary
    pfam00685
    Location:57 → 258
    Sulfotransfer_1; Sulfotransferase domain

  2. XM_029127297.3 → XP_028983130.1  heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like1

    UniProtKB/TrEMBL
    A0A6P7KKN7
    Related
    ENSBSLP00000067924.1, ENSBSLT00000068033.2
    Conserved Domains (1) summary
    pfam00685
    Location:57 → 258
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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