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Ano5 anoctamin 5 [ Peromyscus leucopus (white-footed mouse) ]

Gene ID: 114700521, updated on 15-Mar-2024

Summary

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Gene symbol
Ano5
Gene description
anoctamin 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus leucopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
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Genomic context

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See Ano5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
22
Annotation release Status Assembly Chr Location
101 current UCI_PerLeu_2.1 (GCF_004664715.2) 1 NC_051063.1 (156036061..156108556)
100 previous assembly Pero_0.1 (GCF_004664715.1) Unplaced Scaffold NW_021630310.1 (2654216..2723821)

Chromosome 1 - NC_051063.1Genomic Context describing neighboring genes Neighboring gene neural EGFL like 1 Neighboring gene uncharacterized LOC119086671 Neighboring gene uncharacterized LOC119086669 Neighboring gene probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial Neighboring gene solute carrier family 17 member 6 Neighboring gene FA complementation group F

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus leucopus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_PerLeu_2.1 Primary Assembly

Genomic

  1. NC_051063.1 Reference UCI_PerLeu_2.1 Primary Assembly

    Range
    156036061..156108556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028880173.2 → XP_028736006.2  anoctamin-5

    Conserved Domains (2) summary
    pfam04547
    Location:608 → 1184
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:388 → 605
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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