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Kirrel3 kirre like nephrin family adhesion molecule 3 [ Peromyscus leucopus (white-footed mouse) ]

Gene ID: 114699778, updated on 15-Mar-2024

Summary

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Gene symbol
Kirrel3
Gene description
kirre like nephrin family adhesion molecule 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus leucopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
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Genomic context

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See Kirrel3 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
17
Annotation release Status Assembly Chr Location
101 current UCI_PerLeu_2.1 (GCF_004664715.2) 7 NC_051069.1 (37634101..38193251, complement)
100 previous assembly Pero_0.1 (GCF_004664715.1) Unplaced Scaffold NW_021630292.1 (965518..1527176, complement)

Chromosome 7 - NC_051069.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119088336 Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 4 Neighboring gene decapping enzyme, scavenger Neighboring gene 60S ribosomal protein L9-like Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus leucopus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_PerLeu_2.1 Primary Assembly

Genomic

  1. NC_051069.1 Reference UCI_PerLeu_2.1 Primary Assembly

    Range
    37634101..38193251 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037207646.1 → XP_037063541.1  kin of IRRE-like protein 3 isoform X1

    Conserved Domains (5) summary
    smart00410
    Location:54 → 143
    IG_like; Immunoglobulin like
    cd00096
    Location:343 → 347
    Ig; Ig strand A' [structural motif]
    cd05759
    Location:149 → 246
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:418 → 515
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:335 → 416
    Ig; Immunoglobulin domain

  2. XM_037207647.1 → XP_037063542.1  kin of IRRE-like protein 3 isoform X3

    Conserved Domains (4) summary
    cd00096
    Location:343 → 347
    Ig; Ig strand A' [structural motif]
    cd05759
    Location:149 → 246
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:418 → 515
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:335 → 416
    Ig; Immunoglobulin domain

  3. XM_028879069.2 → XP_028734902.1  kin of IRRE-like protein 3 isoform X2

    Conserved Domains (5) summary
    cd05759
    Location:165 → 246
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    cd05898
    Location:418 → 515
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00409
    Location:54 → 143
    IG; Immunoglobulin
    pfam13895
    Location:254 → 331
    Ig_2; Immunoglobulin domain
    pfam07679
    Location:335 → 416
    I-set; Immunoglobulin I-set domain
Nucleotide Protein
Heading Accession and Version

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