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Ecym_3208 Hypothetical protein [ Eremothecium cymbalariae DBVPG#7215 ]

Gene ID: 11468772, updated on 22-Oct-2023

Summary

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Gene symbol
Ecym_3208
Gene description
Hypothetical protein
Locus tag
Ecym_3208
Gene type
protein coding
RNA name
Hypothetical protein
RefSeq status
PROVISIONAL
Organism
Eremothecium cymbalariae DBVPG#7215 (strain: DBVPG#7215)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium
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Genomic context

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See Ecym_3208 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_016451.1 (395980..397905)

Chromosome 3 - NC_016451.1Genomic Context describing neighboring genes Neighboring gene tRNA-Val Neighboring gene Hypothetical protein Neighboring gene Hypothetical protein Neighboring gene Hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016451.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome evolution in the eremothecium clade of the Saccharomyces complex revealed by comparative genomics. Wendland J, et al. G3 (Bethesda), 2011 Dec. PMID 22384365, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Hypothetical protein
XP_003645523.1
  • similar to Ashbya gossypii AAL050W

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016451.1 Reference assembly

    Range
    395980..397905
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003645475.1 → XP_003645523.1  Hypothetical protein Ecym_3208 [Eremothecium cymbalariae DBVPG#7215]

    See identical proteins and their annotated locations for XP_003645523.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G8JRD7
    Conserved Domains (2) summary
    smart00472
    Location:294 → 347
    MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
    cl21590
    Location:84 → 268
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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