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Ecym_5399 hypothetical protein [ Eremothecium cymbalariae DBVPG#7215 ]

Gene ID: 11468478, updated on 22-Oct-2023

Summary

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Gene symbol
Ecym_5399
Gene description
hypothetical protein
Locus tag
Ecym_5399
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Eremothecium cymbalariae DBVPG#7215 (strain: DBVPG#7215)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium
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Genomic context

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See Ecym_5399 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_016453.1 (811603..812961, complement)

Chromosome 5 - NC_016453.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016453.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome evolution in the eremothecium clade of the Saccharomyces complex revealed by comparative genomics. Wendland J, et al. G3 (Bethesda), 2011 Dec. PMID 22384365, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in fungal-type cell wall organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in fungal-type cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_003646971.1
  • similar to Ashbya gossypii AER372C

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016453.1 Reference assembly

    Range
    811603..812961 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003646923.1 → XP_003646971.1  hypothetical protein Ecym_5399 [Eremothecium cymbalariae DBVPG#7215]

    See identical proteins and their annotated locations for XP_003646971.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    I6NDL2
    Conserved Domains (1) summary
    pfam03856
    Location:196 → 438
    SUN; Beta-glucosidase (SUN family)
Nucleotide Protein
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