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PPM1N protein phosphatase, Mg2+/Mn2+ dependent 1N (putative) [ Podarcis muralis (Common wall lizard) ]

Gene ID: 114603132, updated on 15-Mar-2024

Summary

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Gene symbol
PPM1N
Gene description
protein phosphatase, Mg2+/Mn2+ dependent 1N (putative)
See related
Ensembl:ENSPMRG00000014898
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis muralis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See PPM1N in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
100 current PodMur_1.0 (GCF_004329235.1) 8 NC_041319.1 (3705256..3720215, complement)

Chromosome 8 - NC_041319.1Genomic Context describing neighboring genes Neighboring gene 4F2 cell-surface antigen heavy chain-like Neighboring gene serine/threonine-protein phosphatase PP1-gamma catalytic subunit-like Neighboring gene reticulon 2 Neighboring gene FosB proto-oncogene, AP-1 transcription factor subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041319.1 Chromosome 8 Reference PodMur_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables manganese ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable protein phosphatase 1N

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Podarcis muralis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PodMur_1.0 Primary Assembly

Genomic

  1. NC_041319.1 Reference PodMur_1.0 Primary Assembly

    Range
    3705256..3720215 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028741909.1 → XP_028597742.1  probable protein phosphatase 1N isoform X1

    Conserved Domains (2) summary
    cd00143
    Location:57 → 322
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
    pfam07830
    Location:316 → 387
    PP2C_C; Protein serine/threonine phosphatase 2C, C-terminal domain

  2. XM_028741910.1 → XP_028597743.1  probable protein phosphatase 1N isoform X2

    UniProtKB/TrEMBL
    A0A670JIW4
    Related
    ENSPMRP00000022947.1, ENSPMRT00000024375.1
    Conserved Domains (2) summary
    cd00143
    Location:57 → 322
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
    pfam07830
    Location:316 → 391
    PP2C_C; Protein serine/threonine phosphatase 2C, C-terminal domain

RNA

  1. XR_003708058.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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