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DSEL dermatan sulfate epimerase like [ Podarcis muralis (Common wall lizard) ]

Gene ID: 114600776, updated on 15-Mar-2024

Summary

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Gene symbol
DSEL
Gene description
dermatan sulfate epimerase like
See related
Ensembl:ENSPMRG00000008350
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis muralis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See DSEL in Genome Data Viewer
Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
100 current PodMur_1.0 (GCF_004329235.1) 7 NC_041318.1 (54010614..54016401, complement)

Chromosome 7 - NC_041318.1Genomic Context describing neighboring genes Neighboring gene cadherin 7 Neighboring gene cadherin-19-like Neighboring gene protein-glutamine gamma-glutamyltransferase 5-like Neighboring gene protein-glutamine gamma-glutamyltransferase 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041318.1 Chromosome 7 Reference PodMur_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chondroitin-glucuronate 5-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dermatan sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dermatan-sulfate epimerase-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Podarcis muralis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PodMur_1.0 Primary Assembly

Genomic

  1. NC_041318.1 Reference PodMur_1.0 Primary Assembly

    Range
    54010614..54016401 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028737440.1 → XP_028593273.1  dermatan-sulfate epimerase-like protein

    UniProtKB/TrEMBL
    A0A670ILP6
    Related
    ENSPMRP00000012479.1, ENSPMRT00000013325.1
    Conserved Domains (1) summary
    cl21551
    Location:1022 → 1206
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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