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POFUT1 protein O-fucosyltransferase 1 [ Podarcis muralis (Common wall lizard) ]

Gene ID: 114599840, updated on 15-Mar-2024

Summary

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Gene symbol
POFUT1
Gene description
protein O-fucosyltransferase 1
See related
Ensembl:ENSPMRG00000006535
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis muralis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See POFUT1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
100 current PodMur_1.0 (GCF_004329235.1) 6 NC_041317.1 (96360866..96373899)

Chromosome 6 - NC_041317.1Genomic Context describing neighboring genes Neighboring gene transmembrane 9 superfamily member 4 Neighboring gene PLAG1 like zinc finger 2 Neighboring gene kinesin family member 3B Neighboring gene uncharacterized LOC114599843

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041317.1 Chromosome 6 Reference PodMur_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Podarcis muralis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PodMur_1.0 Primary Assembly

Genomic

  1. NC_041317.1 Reference PodMur_1.0 Primary Assembly

    Range
    96360866..96373899
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028735606.1 → XP_028591439.1  GDP-fucose protein O-fucosyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A670IE35
    Conserved Domains (1) summary
    cd11302
    Location:1 → 320
    O-FucT-1; GDP-fucose protein O-fucosyltransferase 1

  2. XM_028735603.1 → XP_028591436.1  GDP-fucose protein O-fucosyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A670IDL0, A0A670IE35
    Related
    ENSPMRP00000009768.1, ENSPMRT00000010412.1
    Conserved Domains (1) summary
    cd11302
    Location:32 → 381
    O-FucT-1; GDP-fucose protein O-fucosyltransferase 1

  3. XM_028735607.1 → XP_028591440.1  GDP-fucose protein O-fucosyltransferase 1 isoform X3

    Conserved Domains (1) summary
    cd11302
    Location:1 → 271
    O-FucT-1; GDP-fucose protein O-fucosyltransferase 1

  4. XM_028735604.1 → XP_028591437.1  GDP-fucose protein O-fucosyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A670IE35
    Conserved Domains (1) summary
    cd11302
    Location:1 → 320
    O-FucT-1; GDP-fucose protein O-fucosyltransferase 1

  5. XM_028735605.1 → XP_028591438.1  GDP-fucose protein O-fucosyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A670IE35
    Related
    ENSPMRP00000009772.1, ENSPMRT00000010416.1
    Conserved Domains (1) summary
    cd11302
    Location:1 → 320
    O-FucT-1; GDP-fucose protein O-fucosyltransferase 1
Nucleotide Protein
Heading Accession and Version

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