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PIGZ phosphatidylinositol glycan anchor biosynthesis class Z [ Podarcis muralis (Common wall lizard) ]

Gene ID: 114598219, updated on 15-Mar-2024

Summary

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Gene symbol
PIGZ
Gene description
phosphatidylinositol glycan anchor biosynthesis class Z
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis muralis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See PIGZ in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
100 current PodMur_1.0 (GCF_004329235.1) 5 NC_041316.1 (100343565..100357740)

Chromosome 5 - NC_041316.1Genomic Context describing neighboring genes Neighboring gene discs large MAGUK scaffold protein 1 Neighboring gene melanotransferrin Neighboring gene trypsin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041316.1 Chromosome 5 Reference PodMur_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Podarcis muralis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PodMur_1.0 Primary Assembly

Genomic

  1. NC_041316.1 Reference PodMur_1.0 Primary Assembly

    Range
    100343565..100357740
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028731988.1 → XP_028587821.1  GPI mannosyltransferase 4 isoform X1

    UniProtKB/TrEMBL
    A0A670IG59
    Conserved Domains (1) summary
    cl21590
    Location:77 → 530
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_028731991.1 → XP_028587824.1  GPI mannosyltransferase 4 isoform X3

    UniProtKB/TrEMBL
    A0A670IG59
    Conserved Domains (1) summary
    cl21590
    Location:8 → 461
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  3. XM_028731992.1 → XP_028587825.1  GPI mannosyltransferase 4 isoform X3

    UniProtKB/TrEMBL
    A0A670IG59
    Conserved Domains (1) summary
    cl21590
    Location:8 → 461
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  4. XM_028731990.1 → XP_028587823.1  GPI mannosyltransferase 4 isoform X2

    UniProtKB/TrEMBL
    A0A670IG59
    Conserved Domains (1) summary
    cl21590
    Location:47 → 500
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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