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B3GALNT2 beta-1,3-N-acetylgalactosaminyltransferase 2 [ Podarcis muralis (Common wall lizard) ]

Gene ID: 114594411, updated on 15-Mar-2024

Summary

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Gene symbol
B3GALNT2
Gene description
beta-1,3-N-acetylgalactosaminyltransferase 2
See related
Ensembl:ENSPMRG00000001866
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis muralis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See B3GALNT2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
100 current PodMur_1.0 (GCF_004329235.1) 3 NC_041314.1 (77501387..77529913, complement)

Chromosome 3 - NC_041314.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 34 Neighboring gene AT-rich interaction domain 4B Neighboring gene geranylgeranyl diphosphate synthase 1 Neighboring gene G protein subunit gamma 4 Neighboring gene lysosomal trafficking regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041314.1 Chromosome 3 Reference PodMur_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Podarcis muralis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PodMur_1.0 Primary Assembly

Genomic

  1. NC_041314.1 Reference PodMur_1.0 Primary Assembly

    Range
    77501387..77529913 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028724075.1 → XP_028579908.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X3

    Conserved Domains (1) summary
    cl21608
    Location:307 → 454
    Galactosyl_T; Galactosyltransferase

  2. XM_028724074.1 → XP_028579907.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X2

    Conserved Domains (1) summary
    cl21608
    Location:307 → 455
    Galactosyl_T; Galactosyltransferase

  3. XM_028724077.1 → XP_028579910.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X5

    Conserved Domains (1) summary
    cl21608
    Location:224 → 374
    Galactosyl_T; Galactosyltransferase

  4. XM_028724073.1 → XP_028579906.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A670HU44
    Related
    ENSPMRP00000002597.1, ENSPMRT00000002765.1
    Conserved Domains (1) summary
    cl21608
    Location:307 → 457
    Galactosyl_T; Galactosyltransferase

  5. XM_028724076.1 → XP_028579909.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X4

    Conserved Domains (1) summary
    cl21608
    Location:241 → 391
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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