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LOC114593968 alpha-(1,3)-fucosyltransferase 9 [ Podarcis muralis (Common wall lizard) ]

Gene ID: 114593968, updated on 22-Oct-2023

Summary

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Gene symbol
LOC114593968
Gene description
alpha-(1,3)-fucosyltransferase 9
See related
Ensembl:ENSPMRG00000007400
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis muralis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
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Genomic context

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See LOC114593968 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
100 current PodMur_1.0 (GCF_004329235.1) 3 NC_041314.1 (45763867..45816306)

Chromosome 3 - NC_041314.1Genomic Context describing neighboring genes Neighboring gene EPH receptor A7 Neighboring gene mannosidase endo-alpha Neighboring gene alpha-(1,3)-fucosyltransferase 9-like Neighboring gene UFM1 specific ligase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041314.1 Chromosome 3 Reference PodMur_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,3)-fucosyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Podarcis muralis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PodMur_1.0 Primary Assembly

Genomic

  1. NC_041314.1 Reference PodMur_1.0 Primary Assembly

    Range
    45763867..45816306
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028723003.1 → XP_028578836.1  alpha-(1,3)-fucosyltransferase 9 isoform X2

    UniProtKB/TrEMBL
    A0A670IIB9
    Conserved Domains (2) summary
    pfam00852
    Location:234 → 398
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:112 → 218
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

  2. XM_028723002.1 → XP_028578835.1  alpha-(1,3)-fucosyltransferase 9 isoform X1

    UniProtKB/TrEMBL
    A0A670IHL8, A0A670IIB9
    Related
    ENSPMRP00000011094.1, ENSPMRT00000011850.1
    Conserved Domains (2) summary
    pfam00852
    Location:234 → 403
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:112 → 218
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

  3. XM_028723004.1 → XP_028578837.1  alpha-(1,3)-fucosyltransferase 9 isoform X3

    UniProtKB/TrEMBL
    A0A670IIB9
    Conserved Domains (2) summary
    pfam00852
    Location:184 → 353
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:62 → 168
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
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