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CANX calnexin [ Podarcis muralis (Common wall lizard) ]

Gene ID: 114591325, updated on 15-Mar-2024

Summary

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Gene symbol
CANX
Gene description
calnexin
See related
Ensembl:ENSPMRG00000006136
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis muralis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See CANX in Genome Data Viewer
Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
100 current PodMur_1.0 (GCF_004329235.1) 2 NC_041313.1 (61132929..61158663)

Chromosome 2 - NC_041313.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein H1 Neighboring gene deoxycytidine kinase-like Neighboring gene uncharacterized LOC114591330 Neighboring gene chibby family member 3 Neighboring gene mastermind like transcriptional coactivator 1 Neighboring gene leukotriene C4 synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041313.1 Chromosome 2 Reference PodMur_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calnexin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Podarcis muralis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PodMur_1.0 Primary Assembly

Genomic

  1. NC_041313.1 Reference PodMur_1.0 Primary Assembly

    Range
    61132929..61158663
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028718232.1 → XP_028574065.1  calnexin isoform X2

    UniProtKB/TrEMBL
    A0A670IBY4
    Related
    ENSPMRP00000009137.1, ENSPMRT00000009755.1
    Conserved Domains (1) summary
    pfam00262
    Location:79 → 448
    Calreticulin; Calreticulin family

  2. XM_028718231.1 → XP_028574064.1  calnexin isoform X1

    Conserved Domains (1) summary
    pfam00262
    Location:88 → 457
    Calreticulin; Calreticulin family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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