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KIRREL1 kirre like nephrin family adhesion molecule 1 [ Podarcis muralis (Common wall lizard) ]

Gene ID: 114587199, updated on 15-Mar-2024

Summary

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Gene symbol
KIRREL1
Gene description
kirre like nephrin family adhesion molecule 1
See related
Ensembl:ENSPMRG00000020238
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis muralis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See KIRREL1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
15
Annotation release Status Assembly Chr Location
100 current PodMur_1.0 (GCF_004329235.1) 16 NC_041327.1 (313447..439967, complement)

Chromosome 16 - NC_041327.1Genomic Context describing neighboring genes Neighboring gene cellular retinoic acid binding protein 2 Neighboring gene interferon stimulated exonuclease gene 20 like 2 Neighboring gene SLAM family member 9-like Neighboring gene gastrula zinc finger protein XlCGF49.1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041327.1 Chromosome 16 Reference PodMur_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Podarcis muralis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PodMur_1.0 Primary Assembly

Genomic

  1. NC_041327.1 Reference PodMur_1.0 Primary Assembly

    Range
    313447..439967 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028711212.1 → XP_028567045.1  kin of IRRE-like protein 1

    UniProtKB/TrEMBL
    A0A670K4W4
    Related
    ENSPMRP00000031230.1, ENSPMRT00000033129.1
    Conserved Domains (4) summary
    cd05898
    Location:393 → 490
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00410
    Location:29 → 118
    IG_like; Immunoglobulin like
    pfam13927
    Location:310 → 375
    Ig_3; Immunoglobulin domain
    cl11960
    Location:140 → 221
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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