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TECTA tectorin alpha [ Podarcis muralis (Common wall lizard) ]

Gene ID: 114585163, updated on 15-Mar-2024

Summary

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Gene symbol
TECTA
Gene description
tectorin alpha
See related
Ensembl:ENSPMRG00000022663
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis muralis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See TECTA in Genome Data Viewer
Location:
chromosome: 15
Exon count:
22
Annotation release Status Assembly Chr Location
100 current PodMur_1.0 (GCF_004329235.1) 15 NC_041326.1 (23127655..23204780, complement)

Chromosome 15 - NC_041326.1Genomic Context describing neighboring genes Neighboring gene sortilin related receptor 1 Neighboring gene uncharacterized LOC114585162 Neighboring gene sterol-C5-desaturase Neighboring gene tubulin folding cofactor E like Neighboring gene glutamate ionotropic receptor kainate type subunit 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041326.1 Chromosome 15 Reference PodMur_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-tectorin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Podarcis muralis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PodMur_1.0 Primary Assembly

Genomic

  1. NC_041326.1 Reference PodMur_1.0 Primary Assembly

    Range
    23127655..23204780 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028707525.1 → XP_028563358.1  alpha-tectorin

    UniProtKB/TrEMBL
    A0A670KDT6
    Related
    ENSPMRP00000035021.1, ENSPMRT00000037135.1
    Conserved Domains (8) summary
    smart00216
    Location:690 → 841
    VWD; von Willebrand factor (vWF) type D domain
    smart00241
    Location:1780 → 2034
    ZP; Zona pellucida (ZP) domain
    smart00539
    Location:74 → 230
    NIDO; Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins
    smart00832
    Location:493 → 569
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:298 → 454
    VWD; von Willebrand factor type D domain
    cl17735
    Location:629 → 683
    VWC; von Willebrand factor type C domain
    pfam01826
    Location:574 → 627
    TIL; Trypsin Inhibitor like cysteine rich domain
    pfam14670
    Location:2064 → 2096
    FXa_inhibition; Coagulation Factor Xa inhibitory site
Nucleotide Protein
Heading Accession and Version

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