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CSPG4 chondroitin sulfate proteoglycan 4 [ Podarcis muralis (Common wall lizard) ]

Gene ID: 114584266, updated on 15-Mar-2024

Summary

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Gene symbol
CSPG4
Gene description
chondroitin sulfate proteoglycan 4
See related
Ensembl:ENSPMRG00000023377
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis muralis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See CSPG4 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
10
Annotation release Status Assembly Chr Location
100 current PodMur_1.0 (GCF_004329235.1) 14 NC_041325.1 (120144..258021)

Chromosome 14 - NC_041325.1Genomic Context describing neighboring genes Neighboring gene unconventional myosin-XVIIIb-like Neighboring gene ciliary microtubule associated protein 1C Neighboring gene sorting nexin 33 Neighboring gene protein tyrosine phosphatase non-receptor type 9 Neighboring gene SIN3 transcription regulator family member A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041325.1 Chromosome 14 Reference PodMur_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
chondroitin sulfate proteoglycan 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Podarcis muralis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PodMur_1.0 Primary Assembly

Genomic

  1. NC_041325.1 Reference PodMur_1.0 Primary Assembly

    Range
    120144..258021
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028705950.1 → XP_028561783.1  chondroitin sulfate proteoglycan 4 isoform X1

    Conserved Domains (2) summary
    cd00110
    Location:32 → 181
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam16184
    Location:1472 → 1578
    Cadherin_3; Cadherin-like

  2. XM_028705951.1 → XP_028561784.1  chondroitin sulfate proteoglycan 4 isoform X2

    UniProtKB/TrEMBL
    A0A670KMR7
    Related
    ENSPMRP00000036167.1, ENSPMRT00000038329.1
    Conserved Domains (3) summary
    cd00110
    Location:139 → 295
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam02210
    Location:5 → 103
    Laminin_G_2; Laminin G domain
    pfam16184
    Location:1392 → 1498
    Cadherin_3; Cadherin-like
Nucleotide Protein
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