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tab2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [ Perca flavescens (yellow perch) ]

Gene ID: 114573158, updated on 15-Mar-2024

Summary

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Gene symbol
tab2
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 2
Locus tag
EPR50_G00183470
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Orthologs
human zebrafish all
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Genomic context

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See tab2 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
8
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 18 NC_041348.1 (2832680..2879520)

Chromosome 18 - NC_041348.1Genomic Context describing neighboring genes Neighboring gene adenosylmethionine decarboxylase 1 Neighboring gene cyclin-dependent kinase 19 Neighboring gene zinc finger CCCH-type containing 12D Neighboring gene peptidylprolyl isomerase (cyclophilin)-like 4 Neighboring gene glycoprotein integral membrane 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041348.1 Chromosome 18 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041348.1 Reference PFLA_1.0 Primary Assembly

    Range
    2832680..2879520
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028605125.1 → XP_028460926.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A484CDF3
    Conserved Domains (4) summary
    smart00547
    Location:761 → 784
    ZnF_RBZ; Zinc finger domain
    PHA03247
    Location:398 → 583
    PHA03247; large tegument protein UL36; Provisional
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:762 → 781
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  2. XM_028605127.1 → XP_028460928.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

    Conserved Domains (4) summary
    smart00547
    Location:756 → 779
    ZnF_RBZ; Zinc finger domain
    PHA03247
    Location:398 → 583
    PHA03247; large tegument protein UL36; Provisional
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:757 → 776
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  3. XM_028605126.1 → XP_028460927.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A484CDF3
    Conserved Domains (4) summary
    smart00547
    Location:761 → 784
    ZnF_RBZ; Zinc finger domain
    PHA03247
    Location:398 → 583
    PHA03247; large tegument protein UL36; Provisional
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:762 → 781
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  4. XM_028605128.1 → XP_028460929.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X3

    Conserved Domains (4) summary
    smart00547
    Location:734 → 757
    ZnF_RBZ; Zinc finger domain
    PHA03247
    Location:398 → 583
    PHA03247; large tegument protein UL36; Provisional
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:735 → 754
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  5. XM_028605129.1 → XP_028460930.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X4

    Conserved Domains (4) summary
    smart00547
    Location:729 → 752
    ZnF_RBZ; Zinc finger domain
    PHA03247
    Location:398 → 583
    PHA03247; large tegument protein UL36; Provisional
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    sd00029
    Location:730 → 749
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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