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LOC114570339 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like [ Perca flavescens (yellow perch) ]

Gene ID: 114570339, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114570339
Gene description
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like
Locus tag
EPR50_G00165240
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
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Genomic context

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See LOC114570339 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
13
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 15 NC_041345.1 (34729589..34764182)

Chromosome 15 - NC_041345.1Genomic Context describing neighboring genes Neighboring gene synaptogyrin 1a Neighboring gene interferon a3-like Neighboring gene integrin alpha-3-like Neighboring gene RAD52 motif containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041345.1 Chromosome 15 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041345.1 Reference PFLA_1.0 Primary Assembly

    Range
    34729589..34764182
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028600623.1 → XP_028456424.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X1

    Conserved Domains (1) summary
    cl11394
    Location:92 → 362
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_028600622.1 → XP_028456423.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X1

    Conserved Domains (1) summary
    cl11394
    Location:92 → 362
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_028600624.1 → XP_028456425.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X2

    UniProtKB/TrEMBL
    A0A484CNQ0
    Conserved Domains (1) summary
    cl11394
    Location:85 → 355
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
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