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galnt7 UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 [ Perca flavescens (yellow perch) ]

Gene ID: 114569493, updated on 15-Mar-2024

Summary

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Gene symbol
galnt7
Gene description
UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
Locus tag
EPR50_G00021490
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Orthologs
human zebrafish all
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Genomic context

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See galnt7 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 2 NC_041332.1 (39735257..39758924, complement)

Chromosome 2 - NC_041332.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 187 Neighboring gene store-operated calcium entry-associated regulatory factor Neighboring gene ankyrin repeat and SOCS box containing 5b Neighboring gene signal peptidase complex subunit 3 Neighboring gene lysine (K)-specific demethylase 2Aa

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041332.1 Chromosome 2 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosaminyltransferase 7
Names
polypeptide N-acetylgalactosaminyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041332.1 Reference PFLA_1.0 Primary Assembly

    Range
    39735257..39758924 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028599348.1 → XP_028455149.1  N-acetylgalactosaminyltransferase 7 isoform X2

    UniProtKB/TrEMBL
    A0A484DMG5
    Conserved Domains (2) summary
    cd02510
    Location:199 → 507
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:524 → 638
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_028599339.1 → XP_028455140.1  N-acetylgalactosaminyltransferase 7 isoform X1

    UniProtKB/TrEMBL
    A0A484DMG5
    Conserved Domains (2) summary
    cd02510
    Location:199 → 507
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:524 → 638
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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