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LOC114568149 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like [ Perca flavescens (yellow perch) ]

Gene ID: 114568149, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114568149
Gene description
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like
Locus tag
EPR50_G00151890
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
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Genomic context

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See LOC114568149 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
10
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 14 NC_041344.1 (26794029..26890100, complement)

Chromosome 14 - NC_041344.1Genomic Context describing neighboring genes Neighboring gene cleavage and polyadenylation specific factor 1 Neighboring gene poly(ADP-ribose) polymerase family member 10 Neighboring gene CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like Neighboring gene CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041344.1 Chromosome 14 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside (CMP) alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041344.1 Reference PFLA_1.0 Primary Assembly

    Range
    26794029..26890100 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028597566.1 → XP_028453367.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like

    UniProtKB/TrEMBL
    A0A484CLN0
    Conserved Domains (1) summary
    pfam00777
    Location:74 → 328
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_028597564.1 → XP_028453365.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like

    UniProtKB/TrEMBL
    A0A484CLN0
    Conserved Domains (1) summary
    pfam00777
    Location:74 → 328
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_028597565.1 → XP_028453366.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like

    UniProtKB/TrEMBL
    A0A484CLN0
    Conserved Domains (1) summary
    pfam00777
    Location:74 → 328
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_028597563.1 → XP_028453364.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like

    UniProtKB/TrEMBL
    A0A484CLN0
    Conserved Domains (1) summary
    pfam00777
    Location:74 → 328
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  5. XM_028597567.1 → XP_028453368.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1-like

    UniProtKB/TrEMBL
    A0A484CLN0
    Conserved Domains (1) summary
    pfam00777
    Location:74 → 328
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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