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galnt12 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [ Perca flavescens (yellow perch) ]

Gene ID: 114568072, updated on 15-Mar-2024

Summary

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Gene symbol
galnt12
Gene description
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Orthologs
zebrafish all
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Genomic context

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See galnt12 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
10
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 14 NC_041344.1 (19630833..19643450)

Chromosome 14 - NC_041344.1Genomic Context describing neighboring genes Neighboring gene chromosome 14 C18orf21 homolog Neighboring gene POC1 centriolar protein homolog B (Chlamydomonas), like Neighboring gene gamma-aminobutyric acid (GABA) B receptor, 2 Neighboring gene elongator acetyltransferase complex subunit 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041344.1 Chromosome 14 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: polypeptide N-acetylgalactosaminyltransferase 12-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041344.1 Reference PFLA_1.0 Primary Assembly

    Range
    19630833..19643450
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028597440.1 → XP_028453241.1  LOW QUALITY PROTEIN: polypeptide N-acetylgalactosaminyltransferase 12-like

    Conserved Domains (2) summary
    cd02510
    Location:133 → 427
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:441 → 573
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
Nucleotide Protein
Heading Accession and Version

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