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dpy19l4 dpy-19 like 4 [ Perca flavescens (yellow perch) ]

Gene ID: 114567915, updated on 21-Dec-2023

Summary

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Gene symbol
dpy19l4
Gene description
dpy-19 like 4
Locus tag
EPR50_G00146050
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
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Genomic context

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See dpy19l4 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
19
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 14 NC_041344.1 (10110933..10119824)

Chromosome 14 - NC_041344.1Genomic Context describing neighboring genes Neighboring gene tektin 1 Neighboring gene nucleolin 2-like Neighboring gene integrator complex subunit 8 Neighboring gene G1/S-specific cyclin-E2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041344.1 Chromosome 14 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable C-mannosyltransferase DPY19L4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041344.1 Reference PFLA_1.0 Primary Assembly

    Range
    10110933..10119824
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028597172.1 → XP_028452973.1  probable C-mannosyltransferase DPY19L4 isoform X1

    UniProtKB/TrEMBL
    A0A484CPH0
    Conserved Domains (1) summary
    pfam10034
    Location:108 → 762
    Dpy19; Q-cell neuroblast polarisation

  2. XM_028597174.1 → XP_028452975.1  probable C-mannosyltransferase DPY19L4 isoform X2

    Conserved Domains (1) summary
    pfam10034
    Location:108 → 673
    Dpy19; Q-cell neuroblast polarisation
Nucleotide Protein
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