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b3gnt3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 [ Perca flavescens (yellow perch) ]

Gene ID: 114561872, updated on 21-Dec-2023

Summary

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Gene symbol
b3gnt3
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
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Genomic context

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See b3gnt3 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 9 NC_041339.1 (24395800..24404200, complement)

Chromosome 9 - NC_041339.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 5 member 5 Neighboring gene Janus kinase 3 (a protein tyrosine kinase, leukocyte) Neighboring gene uncharacterized LOC114561282 Neighboring gene potassium voltage-gated channel subfamily V member 2-like Neighboring gene uncharacterized LOC114562008 Neighboring gene low-density lipoprotein receptor-related protein 8-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041339.1 Chromosome 9 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041339.1 Reference PFLA_1.0 Primary Assembly

    Range
    24395800..24404200 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028588008.1 → XP_028443809.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3

    Conserved Domains (1) summary
    cl21608
    Location:125 → 316
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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