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tor1aip2 torsin 1A interacting protein 2 [ Perca flavescens (yellow perch) ]

Gene ID: 114561315, updated on 21-Dec-2023

Summary

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Gene symbol
tor1aip2
Gene description
torsin 1A interacting protein 2
Locus tag
EPR50_G00098000
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
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Genomic context

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Location:
chromosome: 9
Exon count:
12
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 9 NC_041339.1 (16023994..16035652)

Chromosome 9 - NC_041339.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114561845 Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene olfactomedin-like 2Ba Neighboring gene activating transcription factor 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041339.1 Chromosome 9 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041339.1 Reference PFLA_1.0 Primary Assembly

    Range
    16023994..16035652
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028587265.1 → XP_028443066.1  torsin-1A-interacting protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A484CZN0
    Conserved Domains (2) summary
    COG5271
    Location:3 → 336
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam05609
    Location:174 → 599
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_028587269.1 → XP_028443070.1  torsin-1A-interacting protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A484CZN0
    Conserved Domains (2) summary
    COG5271
    Location:3 → 335
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam05609
    Location:173 → 598
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  3. XM_028587268.1 → XP_028443069.1  torsin-1A-interacting protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A484CZN0
    Conserved Domains (1) summary
    pfam05609
    Location:114 → 598
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  4. XM_028587270.1 → XP_028443071.1  torsin-1A-interacting protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A484CZN0
    Conserved Domains (1) summary
    pfam05609
    Location:51 → 476
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  5. XM_028587266.1 → XP_028443067.1  torsin-1A-interacting protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A484CZN0
    Conserved Domains (2) summary
    COG5271
    Location:3 → 336
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam05609
    Location:174 → 599
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  6. XM_028587267.1 → XP_028443068.1  torsin-1A-interacting protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A484CZN0
    Conserved Domains (2) summary
    COG5271
    Location:3 → 336
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam05609
    Location:174 → 599
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
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