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st3gal3a ST3 beta-galactoside alpha-2,3-sialyltransferase 3a [ Perca flavescens (yellow perch) ]

Gene ID: 114561203, updated on 15-Mar-2024

Summary

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Gene symbol
st3gal3a
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 3a
Locus tag
EPR50_G00095710
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Also known as
st3gal3
Orthologs
human zebrafish all
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Genomic context

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See st3gal3a in Genome Data Viewer
Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 9 NC_041339.1 (6625736..6681498)

Chromosome 9 - NC_041339.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type Fa Neighboring gene lysine (K)-specific demethylase 4A, genome duplicate a Neighboring gene uncharacterized LOC114561204 Neighboring gene artemin Neighboring gene RAD54 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041339.1 Chromosome 9 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase
Names
ST3 beta-galactoside alpha-2,3-sialyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041339.1 Reference PFLA_1.0 Primary Assembly

    Range
    6625736..6681498
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028587024.1 → XP_028442825.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A484CZ88
    Conserved Domains (1) summary
    pfam00777
    Location:90 → 355
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_028587025.1 → XP_028442826.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A484CZ88
    Conserved Domains (1) summary
    pfam00777
    Location:90 → 355
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_028587026.1 → XP_028442827.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase isoform X2

    Conserved Domains (1) summary
    pfam00777
    Location:90 → 231
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_028587023.1 → XP_028442824.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A484CZ88
    Conserved Domains (1) summary
    pfam00777
    Location:90 → 355
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  5. XM_028587022.1 → XP_028442823.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A484CZ88
    Conserved Domains (1) summary
    pfam00777
    Location:90 → 355
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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