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st8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [ Perca flavescens (yellow perch) ]

Gene ID: 114560550, updated on 15-Mar-2024

Summary

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Gene symbol
st8sia2
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
Locus tag
EPR50_G00089210
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Orthologs
human zebrafish all
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Genomic context

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See st8sia2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
7
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 8 NC_041338.1 (24066388..24079752)

Chromosome 8 - NC_041338.1Genomic Context describing neighboring genes Neighboring gene si:dkeyp-59c12.1 Neighboring gene solute carrier organic anion transporter family member 3A1a Neighboring gene family with sequence similarity 174 member B Neighboring gene chromodomain helicase DNA binding protein 2 Neighboring gene uncharacterized LOC114560470 Neighboring gene repulsive guidance molecule BMP co-receptor a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041338.1 Chromosome 8 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-2,8-sialyltransferase 8B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041338.1 Reference PFLA_1.0 Primary Assembly

    Range
    24066388..24079752
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028585995.1 → XP_028441796.1  alpha-2,8-sialyltransferase 8B isoform X1

    UniProtKB/TrEMBL
    A0A484D4V8
    Conserved Domains (1) summary
    pfam00777
    Location:111 → 370
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_028585996.1 → XP_028441797.1  alpha-2,8-sialyltransferase 8B isoform X2

    Conserved Domains (1) summary
    pfam00777
    Location:111 → 279
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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