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gcnt3 glucosaminyl (N-acetyl) transferase 3, mucin type [ Perca flavescens (yellow perch) ]

Gene ID: 114560074, updated on 15-Mar-2024

Summary

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Gene symbol
gcnt3
Gene description
glucosaminyl (N-acetyl) transferase 3, mucin type
Locus tag
EPR50_G00088790
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Orthologs
human zebrafish all
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Genomic context

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See gcnt3 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
1
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 8 NC_041338.1 (22824174..22825382)

Chromosome 8 - NC_041338.1Genomic Context describing neighboring genes Neighboring gene OTU deubiquitinase 7A Neighboring gene proprotein convertase subtilisin/kexin type 5-like Neighboring gene proprotein convertase subtilisin/kexin type 5-like Neighboring gene beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041338.1 Chromosome 8 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041338.1 Reference PFLA_1.0 Primary Assembly

    Range
    22824174..22825382
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028585230.1 → XP_028441031.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like

    UniProtKB/TrEMBL
    A0A484D2U3
    Conserved Domains (1) summary
    pfam02485
    Location:98 → 365
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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