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ano5a anoctamin 5a [ Perca flavescens (yellow perch) ]

Gene ID: 114559821, updated on 15-Mar-2024

Summary

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Gene symbol
ano5a
Gene description
anoctamin 5a
Locus tag
EPR50_G00087910
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Also known as
ano5
Orthologs
human zebrafish all
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Genomic context

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See ano5a in Genome Data Viewer
Location:
chromosome: 8
Exon count:
23
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 8 NC_041338.1 (21111051..21129774, complement)

Chromosome 8 - NC_041338.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 17 member 6a Neighboring gene P2Y purinoceptor 3-like Neighboring gene anoctamin-9-like Neighboring gene uncharacterized LOC114559727 Neighboring gene single immunoglobulin and toll-interleukin 1 receptor (TIR) domain

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041338.1 Chromosome 8 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-5
Names
anoctamin 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041338.1 Reference PFLA_1.0 Primary Assembly

    Range
    21111051..21129774 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028584763.1 → XP_028440564.1  anoctamin-5 isoform X1

    UniProtKB/TrEMBL
    A0A484D2T6
    Conserved Domains (2) summary
    pfam04547
    Location:338 → 926
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:118 → 335
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  2. XM_028584764.1 → XP_028440565.1  anoctamin-5 isoform X2

    UniProtKB/TrEMBL
    A0A484D2T6
    Conserved Domains (2) summary
    pfam04547
    Location:338 → 924
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:118 → 335
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  3. XM_028584765.1 → XP_028440566.1  anoctamin-5 isoform X3

    UniProtKB/TrEMBL
    A0A484D2T6
    Conserved Domains (2) summary
    pfam04547
    Location:278 → 866
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:58 → 275
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  4. XM_028584766.1 → XP_028440567.1  anoctamin-5 isoform X4

    UniProtKB/TrEMBL
    A0A484D2T6
    Conserved Domains (2) summary
    pfam04547
    Location:233 → 821
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:13 → 230
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin
Nucleotide Protein
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