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prickle3 prickle homolog 3 [ Perca flavescens (yellow perch) ]

Gene ID: 114559147, updated on 12-Sep-2024

Summary

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Gene symbol
prickle3
Gene description
prickle homolog 3
Locus tag
EPR50_G00073080
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Orthologs
human zebrafish all
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Genomic context

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See prickle3 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 7 NC_041337.1 (10516563..10540369, complement)

Chromosome 7 - NC_041337.1Genomic Context describing neighboring genes Neighboring gene major facilitator superfamily domain containing 2a-like 2 Neighboring gene family with sequence similarity 110 member A Neighboring gene proteolipid protein 2b Neighboring gene synaptophysin b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041337.1 Chromosome 7 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prickle planar cell polarity protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041337.1 Reference PFLA_1.0 Primary Assembly

    Range
    10516563..10540369 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028583631.1 → XP_028439432.1  prickle planar cell polarity protein 3

    UniProtKB/TrEMBL
    A0A484D4J6
    Conserved Domains (4) summary
    cd09415
    Location:185 → 243
    LIM1_Prickle; The first LIM domain of Prickle
    cd09418
    Location:248 → 303
    LIM2_Prickle; The second LIM domain of Prickle
    cd09420
    Location:308 → 366
    LIM3_Prickle; The third LIM domain of Prickle
    cd09827
    Location:81 → 177
    PET_Prickle; The PET domain of Prickle
Nucleotide Protein
Heading Accession and Version

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