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si:dkey-150i13.2 mitochondrial carnitine/acylcarnitine carrier protein-like [ Perca flavescens (yellow perch) ]

Gene ID: 114559038, updated on 15-Mar-2024

Summary

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Gene symbol
si:dkey-150i13.2
Gene description
mitochondrial carnitine/acylcarnitine carrier protein-like
Locus tag
EPR50_G00082400
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Orthologs
zebrafish all
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Genomic context

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See si:dkey-150i13.2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 7 NC_041337.1 (39846140..39879164)

Chromosome 7 - NC_041337.1Genomic Context describing neighboring genes Neighboring gene 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase-like Neighboring gene necdin-like 2 Neighboring gene tafazzin, phospholipid-lysophospholipid transacylase Neighboring gene V-type proton ATPase subunit S1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041337.1 Chromosome 7 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041337.1 Reference PFLA_1.0 Primary Assembly

    Range
    39846140..39879164
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028583434.1 → XP_028439235.1  mitochondrial carnitine/acylcarnitine carrier protein-like isoform X1

    Conserved Domains (1) summary
    pfam00153
    Location:116 → 200
    Mito_carr; Mitochondrial carrier protein

  2. XM_028583435.1 → XP_028439236.1  mitochondrial carnitine/acylcarnitine carrier protein-like isoform X2

    UniProtKB/TrEMBL
    A0A484D7D1
    Conserved Domains (1) summary
    pfam00153
    Location:106 → 196
    Mito_carr; Mitochondrial carrier protein

  3. XM_028583436.1 → XP_028439237.1  mitochondrial carnitine/acylcarnitine carrier protein-like isoform X3

    Conserved Domains (1) summary
    pfam00153
    Location:85 → 169
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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