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nkd2b NKD inhibitor of WNT signaling pathway 2b [ Perca flavescens (yellow perch) ]

Gene ID: 114557566, updated on 15-Mar-2024

Summary

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Gene symbol
nkd2b
Gene description
NKD inhibitor of WNT signaling pathway 2b
Locus tag
EPR50_G00065540
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Also known as
nkd2
Orthologs
human zebrafish all
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Genomic context

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See nkd2b in Genome Data Viewer
Location:
chromosome: 6
Exon count:
10
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 6 NC_041336.1 (20896782..20927499)

Chromosome 6 - NC_041336.1Genomic Context describing neighboring genes Neighboring gene zinc finger DHHC-type containing 11 Neighboring gene bromodomain containing 9 Neighboring gene thyroid hormone receptor interactor 13 Neighboring gene uncharacterized LOC114557042 Neighboring gene phosphatidylserine synthase 1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041336.1 Chromosome 6 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein naked cuticle homolog 2
Names
NKD inhibitor of WNT signaling pathway 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041336.1 Reference PFLA_1.0 Primary Assembly

    Range
    20896782..20927499
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028581105.1 → XP_028436906.1  protein naked cuticle homolog 2 isoform X1

    UniProtKB/TrEMBL
    A0A484D9F0

  2. XM_028581106.1 → XP_028436907.1  protein naked cuticle homolog 2 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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