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gal3st1a galactose-3-O-sulfotransferase 1a [ Perca flavescens (yellow perch) ]

Gene ID: 114556046, updated on 15-Mar-2024

Summary

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Gene symbol
gal3st1a
Gene description
galactose-3-O-sulfotransferase 1a
Locus tag
EPR50_G00050280
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Also known as
gal3st1
Orthologs
human zebrafish all
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Genomic context

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See gal3st1a in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 5 NC_041335.1 (17062462..17065228, complement)

Chromosome 5 - NC_041335.1Genomic Context describing neighboring genes Neighboring gene claudin 26 Neighboring gene leucine zipper like post translational regulator 1 Neighboring gene pescadillo Neighboring gene purinergic receptor P2X, ligand-gated ion channel, 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041335.1 Chromosome 5 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactosylceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in myelination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylceramide sulfotransferase
Names
galactose-3-O-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041335.1 Reference PFLA_1.0 Primary Assembly

    Range
    17062462..17065228 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028578878.1 → XP_028434679.1  galactosylceramide sulfotransferase

    UniProtKB/TrEMBL
    A0A484DE64
    Conserved Domains (1) summary
    cl22970
    Location:5 → 409
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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