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znrf3 zinc and ring finger 3 [ Perca flavescens (yellow perch) ]

Gene ID: 114555561, updated on 15-Mar-2024

Summary

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Gene symbol
znrf3
Gene description
zinc and ring finger 3
Locus tag
EPR50_G00054300
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Orthologs
human zebrafish all
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Genomic context

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See znrf3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 5 NC_041335.1 (29117535..29192615)

Chromosome 5 - NC_041335.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 60 Neighboring gene X-box binding protein 1 Neighboring gene coenzyme Q5, methyltransferase Neighboring gene kringle containing transmembrane protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041335.1 Chromosome 5 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables frizzled binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Wnt receptor catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase ZNRF3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041335.1 Reference PFLA_1.0 Primary Assembly

    Range
    29117535..29192615
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028578046.1 → XP_028433847.1  E3 ubiquitin-protein ligase ZNRF3

    UniProtKB/TrEMBL
    A0A484DCC0
    Conserved Domains (1) summary
    cd16799
    Location:268 → 312
    RING-H2_ZNRF3; RING finger, H2 subclass, found in zinc/RING finger protein 3 (ZNRF3) and similar proteins
Nucleotide Protein
Heading Accession and Version

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