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LOC114554518 N-acetyllactosaminide alpha-1,3-galactosyltransferase-like [ Perca flavescens (yellow perch) ]

Gene ID: 114554518, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114554518
Gene description
N-acetyllactosaminide alpha-1,3-galactosyltransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
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Genomic context

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See LOC114554518 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 1 NC_041331.1 (36491730..36496619)

Chromosome 1 - NC_041331.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit 5A, mitochondrial-like Neighboring gene N-acetyllactosaminide alpha-1,3-galactosyltransferase-like Neighboring gene N-acetyllactosaminide alpha-1,3-galactosyltransferase-like Neighboring gene N-acetyllactosaminide alpha-1,3-galactosyltransferase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041331.1 Chromosome 1 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide alpha-1,3-galactosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041331.1 Reference PFLA_1.0 Primary Assembly

    Range
    36491730..36496619
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028576453.1 → XP_028432254.1  N-acetyllactosaminide alpha-1,3-galactosyltransferase-like

    Conserved Domains (1) summary
    cd02515
    Location:8 → 276
    Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens
Nucleotide Protein
Heading Accession and Version

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