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large2 LARGE xylosyl- and glucuronyltransferase 2 [ Perca flavescens (yellow perch) ]

Gene ID: 114553876, updated on 15-Mar-2024

Summary

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Gene symbol
large2
Gene description
LARGE xylosyl- and glucuronyltransferase 2
Locus tag
EPR50_G00009110
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Orthologs
zebrafish all
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Genomic context

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See large2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 1 NC_041331.1 (42186788..42228888)

Chromosome 1 - NC_041331.1Genomic Context describing neighboring genes Neighboring gene transfer RNA valine (anticodon UAC) Neighboring gene uncharacterized LOC114560585 Neighboring gene uncharacterized LOC114560173 Neighboring gene uncharacterized LOC114560216 Neighboring gene scavenger receptor cysteine-rich type 1 protein M130-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041331.1 Chromosome 1 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LARGE xylosyl- and glucuronyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041331.1 Reference PFLA_1.0 Primary Assembly

    Range
    42186788..42228888
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028575313.1 → XP_028431114.1  LARGE xylosyl- and glucuronyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A484DPK7
    Conserved Domains (2) summary
    cd06431
    Location:133 → 412
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:468 → 737
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  2. XM_028575321.1 → XP_028431122.1  LARGE xylosyl- and glucuronyltransferase 2 isoform X2

    Conserved Domains (2) summary
    cd06431
    Location:133 → 412
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:466 → 735
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
Nucleotide Protein
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