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sgcg sarcoglycan, gamma [ Perca flavescens (yellow perch) ]

Gene ID: 114552236, updated on 15-Mar-2024

Summary

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Gene symbol
sgcg
Gene description
sarcoglycan, gamma
Locus tag
EPR50_G00027500
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Orthologs
human zebrafish all
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Genomic context

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See sgcg in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 3 NC_041333.1 (24380656..24393297, complement)

Chromosome 3 - NC_041333.1Genomic Context describing neighboring genes Neighboring gene TNF receptor superfamily member 19 Neighboring gene sacsin molecular chaperone Neighboring gene ribosomal protein S25 Neighboring gene trafficking protein particle complex subunit 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041333.1 Chromosome 3 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041333.1 Reference PFLA_1.0 Primary Assembly

    Range
    24380656..24393297 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028572893.1 → XP_028428694.1  gamma-sarcoglycan

    UniProtKB/TrEMBL
    A0A484DIS5
    Conserved Domains (1) summary
    pfam04790
    Location:25 → 279
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_028572894.1 → XP_028428695.1  gamma-sarcoglycan

    UniProtKB/TrEMBL
    A0A484DIS5
    Conserved Domains (1) summary
    pfam04790
    Location:25 → 279
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  3. XM_028572895.1 → XP_028428696.1  gamma-sarcoglycan

    UniProtKB/TrEMBL
    A0A484DIS5
    Conserved Domains (1) summary
    pfam04790
    Location:25 → 279
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  4. XM_028572891.1 → XP_028428692.1  gamma-sarcoglycan

    UniProtKB/TrEMBL
    A0A484DIS5
    Conserved Domains (1) summary
    pfam04790
    Location:25 → 279
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  5. XM_028572896.1 → XP_028428697.1  gamma-sarcoglycan

    UniProtKB/TrEMBL
    A0A484DIS5
    Conserved Domains (1) summary
    pfam04790
    Location:25 → 279
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

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