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alg11 ALG11 alpha-1,2-mannosyltransferase [ Perca flavescens (yellow perch) ]

Gene ID: 114551090, updated on 18-Sep-2024

Summary

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Gene symbol
alg11
Gene description
ALG11 alpha-1,2-mannosyltransferase
Locus tag
EPR50_G00237700
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Orthologs
human zebrafish all
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Genomic context

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See alg11 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
5
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 24 NC_041354.1 (9655342..9658811, complement)

Chromosome 24 - NC_041354.1Genomic Context describing neighboring genes Neighboring gene T-cell-specific surface glycoprotein CD28-like Neighboring gene Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b Neighboring gene secreted phosphoprotein 2 Neighboring gene carboxypeptidase B2 (plasma) Neighboring gene zinc finger CCCH-type containing 13

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041354.1 Chromosome 24 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041354.1 Reference PFLA_1.0 Primary Assembly

    Range
    9655342..9658811 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028572167.1 → XP_028427968.1  LOW QUALITY PROTEIN: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase

    Conserved Domains (1) summary
    cd03806
    Location:62 → 481
    GT4_ALG11-like; alpha-1,2-mannosyltransferase ALG11 and similar proteins
Nucleotide Protein
Heading Accession and Version

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