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dnajb6b DnaJ heat shock protein family (Hsp40) member B6b [ Perca flavescens (yellow perch) ]

Gene ID: 114549096, updated on 15-Mar-2024

Summary

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Gene symbol
dnajb6b
Gene description
DnaJ heat shock protein family (Hsp40) member B6b
Locus tag
EPR50_G00225370
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Also known as
dnajb6
Orthologs
human zebrafish all
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Genomic context

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See dnajb6b in Genome Data Viewer
Location:
chromosome: 22
Exon count:
11
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 22 NC_041352.1 (17382509..17407809)

Chromosome 22 - NC_041352.1Genomic Context describing neighboring genes Neighboring gene motor neuron and pancreas homeobox 1 Neighboring gene ubiquitin protein ligase E3C Neighboring gene protein tyrosine phosphatase receptor type N2 Neighboring gene non-SMC condensin II complex, subunit G2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041352.1 Chromosome 22 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6
Names
DnaJ heat shock protein family (Hsp40) member B6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041352.1 Reference PFLA_1.0 Primary Assembly

    Range
    17382509..17407809
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028569257.1 → XP_028425058.1  dnaJ homolog subfamily B member 6 isoform X1

    UniProtKB/TrEMBL
    A0A484C6W6
    Conserved Domains (1) summary
    COG0484
    Location:3 → 108
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  2. XM_028569256.1 → XP_028425057.1  dnaJ homolog subfamily B member 6 isoform X1

    UniProtKB/TrEMBL
    A0A484C6W6
    Conserved Domains (1) summary
    COG0484
    Location:3 → 108
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  3. XM_028569255.1 → XP_028425056.1  dnaJ homolog subfamily B member 6 isoform X1

    UniProtKB/TrEMBL
    A0A484C6W6
    Conserved Domains (1) summary
    COG0484
    Location:3 → 108
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  4. XM_028569258.1 → XP_028425059.1  dnaJ homolog subfamily B member 6 isoform X2

    Conserved Domains (1) summary
    COG0484
    Location:3 → 107
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  5. XM_028569259.1 → XP_028425060.1  dnaJ homolog subfamily B member 6 isoform X3

    Conserved Domains (1) summary
    COG0484
    Location:3 → 107
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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