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ctnnd2a catenin (cadherin-associated protein), delta 2a [ Perca flavescens (yellow perch) ]

Gene ID: 114549076, updated on 15-Mar-2024

Summary

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Gene symbol
ctnnd2a
Gene description
catenin (cadherin-associated protein), delta 2a
Locus tag
EPR50_G00223120
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Orthologs
zebrafish all
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Genomic context

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See ctnnd2a in Genome Data Viewer
Location:
chromosome: 22
Exon count:
25
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 22 NC_041352.1 (10764526..11016014)

Chromosome 22 - NC_041352.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114548929 Neighboring gene zinc finger, C2HC-type containing 1A Neighboring gene ankyrin repeat domain 33ba Neighboring gene death-associated protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041352.1 Chromosome 22 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dendritic spine morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
catenin delta-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041352.1 Reference PFLA_1.0 Primary Assembly

    Range
    10764526..11016014
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028569226.1 → XP_028425027.1  catenin delta-2-like

    UniProtKB/TrEMBL
    A0A484C6C2
    Conserved Domains (4) summary
    smart00185
    Location:495 → 535
    ARM; Armadillo/beta-catenin-like repeats
    PLN03200
    Location:464 → 638
    PLN03200; cellulose synthase-interactive protein; Provisional
    sd00043
    Location:466 → 491
    ARM; armadillo repeat [structural motif]
    pfam00514
    Location:539 → 580
    Arm; Armadillo/beta-catenin-like repeat
Nucleotide Protein
Heading Accession and Version

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